Organism GeneName Synonym Gene_Age 4-tier-Category-(PMID) FamID_Figure2 Pathway DDR-subNetwork PMID_of-interaction Displacements-in-phylogeny classification-tree Agreement_species_tree single_gene_tree MultiGene_tree UniprotID UniprotName EnsemblID Descritpion Arabidopsis_thaliana 2 - - - - - Detected_by_InP_as_ortholog_of_hH2AX - - - - - Q8GUH3 Q8GUH3_ARATH - Histone_H2A Arabidopsis_thaliana APE1L - - - - - 20646326 - - - - - Q5XF07 APEX_ARATH - DNA-(apurinic_or_apyrimidinic_site)_lyase Arabidopsis_thaliana ASK10 - - - - - 12381738 - - - - - Q9C5T5 Q9C5T5_ARATH - SKP1-like_protein_ASK10_(Fragment) Arabidopsis_thaliana At1g11780 - - - - - 20646326 - - - - - Q9SA98 ALKBH_ARATH - Alpha-ketoglutarate-dependent_dioxygenase_alkB Arabidopsis_thaliana AT1G75230 - - - - - 20646326 - - - - - Q9C5J2 Q9C5J2_ARATH - DNA_glycosylase_superfamily_protein Arabidopsis_thaliana AT1G80210 - - - - - Detected_by_InP_as_ortholog_of_hBRCC3 - - - - - Q8RW94 Q8RW94_ARATH - At1g80210/F18B13_28 Arabidopsis_thaliana At2g01440 - - - - - 20646326 - - - - - Q9ZVG0 Q9ZVG0_ARATH - Putative_ATP-dependent_DNA_helicase_RECG Arabidopsis_thaliana At3g02820/F13E7_24 - - - - - Detected_by_InP_as_ortholog_of_hTIPIN - - - - - Q8GW91 Q8GW91_ARATH - At3g02820 Arabidopsis_thaliana AT3G07930 - - - - - 20646326 - - - - - Q0IGK1 Q0IGK1_ARATH - At3g07930 Arabidopsis_thaliana AT3G27640 - - - - - Detected_by_InP_as_ortholog_of_hDTL - - - - - Q94C55 Q94C55_ARATH - Putative_uncharacterized_protein_At3g27640 Arabidopsis_thaliana At3g48420 - - - - - 20646326 - - - - - Q94K71 GPPL2_ARATH - Haloacid_dehalogenase-like_hydrolase_domain-containing_protein_At3g48420 Arabidopsis_thaliana At4g11060 - - - - - 20646326 - - - - - Q84J78 SSBP_ARATH - Single-stranded_DNA-binding_protein,_mitochondrial Arabidopsis_thaliana AT4g32960 - - - - - Detected_by_InP_as_ortholog_of_hMRI40 - - - - - O82638 O82638_ARATH - At4g32960 Arabidopsis_thaliana At5g22750 - - - - - 20646326 - - - - - Q9FNI6 SM3L2_ARATH - Putative_SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_A_member_3-like_2 Arabidopsis_thaliana AT5G42470 - - - - - Detected_by_InP_as_ortholog_of_hBRE - - - - - Q5XF81 Q5XF81_ARATH - At5g42470 Arabidopsis_thaliana AtATRIP - - - - - 19619159 - - - - - C8KI33 C8KI33_ARATH - ATR_interacting_protein Arabidopsis_thaliana ATCSA-1 - - - - - 20646326 - - - - - Q93ZG3 Q93ZG3_ARATH - At1g27840/F28L5_15 Arabidopsis_thaliana ATIM - - - - - Detected_by_InP_as_ortholog_of_hTIM - - - - - Q9FLX0 Q9FLX0_ARATH - Timeless_family_protein Arabidopsis_thaliana ATM - - - - - 20646326 - - - - - Q9M3G7 ATM_ARATH - Serine/threonine-protein_kinase_ATM Arabidopsis_thaliana ATR - - - - - 20646326 - - - - - Q9FKS4 ATR_ARATH - Serine/threonine-protein_kinase_ATR Arabidopsis_thaliana AtRAD54 - - - - - 20646326 - - - - - Q0PCS3 Q0PCS3_ARATH - RAD54-like_protein Arabidopsis_thaliana ATXRCC1 - - - - - 20646326 - - - - - Q24JK4 Q24JK4_ARATH - At1g80420 Arabidopsis_thaliana AXR1 - - - - - 20646326 - - - - - P42744 ULA1_ARATH - NEDD8-activating_enzyme_E1_regulatory_subunit Arabidopsis_thaliana BARD1 - - - - - 20646326 - - - - - F4I443 F4I443_ARATH - BRCA1-associated_RING_domain_protein Arabidopsis_thaliana BHLH140 - - - - - 20646326 - - - - - Q9M041 BH140_ARATH - Transcription_factor_bHLH140 Arabidopsis_thaliana BRCA1 - - - - - 20646326 - - - - - Q8RXD4 BRCA1_ARATH - Protein_BREAST_CANCER_SUSCEPTIBILITY_1_homolog Arabidopsis_thaliana brca2b - - - - - 20646326 - - - - - Q7Y1C4 Q7Y1C4_ARATH - Breast_cancer_susceptibility_protein_2b Arabidopsis_thaliana CDKD-1 - - - - - 20646326 - - - - - Q9C9U2 CDKD1_ARATH - Cyclin-dependent_kinase_D-1 Arabidopsis_thaliana CDT1B - - - - - 15928083 - - - - - Q9M1S9 CDT1B_ARATH - CDT1-like_protein_b Arabidopsis_thaliana CHR8 - - - - - 20646326 - - - - - Q9ZV43 Q9ZV43_ARATH - Chromatin_remodeling_8 Arabidopsis_thaliana CIPK3 - - - - - 20646326 - - - - - Q2V452 CIPK3_ARATH - CBL-interacting_serine/threonine-protein_kinase_3 Arabidopsis_thaliana CPK21 - - - - - 20646326 - - - - - Q9ZSA2 CDPKL_ARATH - Calcium-dependent_protein_kinase_21 Arabidopsis_thaliana CRY1 - - - - - 20646326 - - - - - Q43125 CRY1_ARATH - Cryptochrome-1 Arabidopsis_thaliana CRY2 - - - - - 20646326 - - - - - Q96524 CRY2_ARATH - Cryptochrome-2 Arabidopsis_thaliana CRYD - - - - - 20646326 - - - - - Q84KJ5 CRYD_ARATH - Cryptochrome_DASH,_chloroplastic/mitochondrial Arabidopsis_thaliana CUL4 - - - - - 20646326 - - - - - Q8LGH4 CUL4_ARATH - Cullin-4 Arabidopsis_thaliana CYCH1-1 - - - - - 20646326 - - - - - Q8W5S1 CCH11_ARATH - Cyclin-H1-1 Arabidopsis_thaliana DDB1A - - - - - 20646326 - - - - - Q9M0V3 DDB1A_ARATH - DNA_damage-binding_protein_1a Arabidopsis_thaliana DDB2 - - - - - 20646326 - - - - - Q6NQ88 DDB2_ARATH - Protein_DAMAGED_DNA-BINDING_2 Arabidopsis_thaliana DET1 - - - - - 20646326 - - - - - P48732 DET1_ARATH - Light-mediated_development_protein_DET1 Arabidopsis_thaliana dl3525w - - - - - Detected_by_InP_as_ortholog_of_hFACD2 - - - - - O23351 O23351_ARATH - Putative_uncharacterized_protein Arabidopsis_thaliana DRT100 - - - - - 21867786 - - - - - Q00874 DR100_ARATH - DNA-damage-repair/toleration_protein_DRT100 Arabidopsis_thaliana EME1A - - - - - 20646326 - - - - - Q84M98 EME1A_ARATH - Crossover_junction_endonuclease_EME1A Arabidopsis_thaliana ERCC1 - - - - - 20646326 - - - - - Q9MA98 ERCC1_ARATH - DNA_excision_repair_protein_ERCC-1 Arabidopsis_thaliana EXO1 - - - - - 20646326 - - - - - Q8L6Z7 EXO1_ARATH - Exonuclease_1 Arabidopsis_thaliana F11A17.14 - - - - - Detected_by_InP_as_ortholog_of_hSMAL1 - - - - - Q9SX64 Q9SX64_ARATH - F11A17.14_protein Arabidopsis_thaliana F6D8.25 - - - - - 20646326 - - - - - Q9SSQ5 Q9SSQ5_ARATH - F6D8.25 Arabidopsis_thaliana FPG1 - - - - - 20646326 - - - - - O80358 FPG_ARATH - Formamidopyrimidine-DNA_glycosylase Arabidopsis_thaliana GR1 - - - - - 21867786 - - - - - Q9ZRT1 GR1_ARATH - Protein_gamma_response_1 Arabidopsis_thaliana GRF2 - - - - - Detected_by_InP_as_ortholog_of_h1433E - - - - - Q01525 14332_ARATH - 14-3-3-like_protein_GF14_omega Arabidopsis_thaliana HAG5 - - - - - Detected_by_InP_as_ortholog_of_hMYST1 - - - - - Q9LXD7 MYST2_ARATH - MYST-like_histone_acetyltransferase_2 Arabidopsis_thaliana HMGB1 - - - - - 20646326 - - - - - O49595 HMGB1_ARATH - High_mobility_group_B_protein_1 Arabidopsis_thaliana KU70 - - - - - 20646326 - - - - - Q9FQ08 KU70_ARATH - ATP-dependent_DNA_helicase_2_subunit_KU70 Arabidopsis_thaliana KU80 - - - - - 20646326 - - - - - Q9FQ09 KU80_ARATH - ATP-dependent_DNA_helicase_2_subunit_KU80 Arabidopsis_thaliana LIG1 - - - - - 20646326 - - - - - Q42572 DNLI1_ARATH - DNA_ligase_1 Arabidopsis_thaliana LIG4 - - - - - 20646326 - - - - - Q9LL84 DNLI4_ARATH - DNA_ligase_4 Arabidopsis_thaliana LIM15 - - - - - 20646326 - - - - - Q39009 DMC1_ARATH - Meiotic_recombination_protein_DMC1_homolog Arabidopsis_thaliana MAG - - - - - 20646326 - - - - - Q39147 3MG_ARATH - DNA-3-methyladenine_glycosylase Arabidopsis_thaliana mei1 - - - - - Detected_by_InP_as_ortholog_of_hTOPBP1 - - - - - Q70X85 Q70X85_ARATH - MEI1_protein Arabidopsis_thaliana MLH1 - - - - - 20646326 - - - - - Q9ZRV4 MLH1_ARATH - DNA_mismatch_repair_protein_MLH1 Arabidopsis_thaliana MND1 - - - - - 20646326 - - - - - Q8GYD2 MND1_ARATH - Meiotic_nuclear_division_protein_1_homolog Arabidopsis_thaliana MRE11 - - - - - 20646326 - - - - - Q9XGM2 MRE11_ARATH - Double-strand_break_repair_protein_MRE11 Arabidopsis_thaliana MSH2 - - - - - 20646326 - - - - - O24617 MSH2_ARATH - DNA_mismatch_repair_protein_MSH2 Arabidopsis_thaliana MSH3 - - - - - 20646326 - - - - - O65607 MSH3_ARATH - DNA_mismatch_repair_protein_MSH3 Arabidopsis_thaliana MSH6 - - - - - 20646326 - - - - - O04716 MSH6_ARATH - DNA_mismatch_repair_protein_MSH6 Arabidopsis_thaliana MTG13.7 - - - - - 20646326 - - - - - Q8W489 Q8W489_ARATH - At5g16630 Arabidopsis_thaliana MUS81 - - - - - 20646326 - - - - - Q5W9E7 MUS81_ARATH - Crossover_junction_endonuclease_MUS81 Arabidopsis_thaliana MYH - - - - - 20646326 - - - - - F4JRF4 MUTYH_ARATH - A/G-specific_adenine_DNA_glycosylase Arabidopsis_thaliana NBS1 - - - - - 20646326 - - - - - Q0H8D7 Q0H8D7_ARATH - NBS1 Arabidopsis_thaliana NTH2 - - - - - 20646326 - - - - - Q94EJ4 Q94EJ4_ARATH - At1g05900/T20M3_15 Arabidopsis_thaliana PARP1 - - - - - 20646326 - - - - - Q9ZP54 PARP1_ARATH - Poly_[ADP-ribose]_polymerase_1 Arabidopsis_thaliana PARP2 - - - - - 20646326 - - - - - Q11207 PARP2_ARATH - Poly_[ADP-ribose]_polymerase_2 Arabidopsis_thaliana PARP3 - - - - - 20646326 - - - - - Q9FK91 PARP3_ARATH - Poly_[ADP-ribose]_polymerase_3 Arabidopsis_thaliana PCNA - - - - - 20646326 - - - - - Q9M7Q7 PCNA1_ARATH - Proliferating_cellular_nuclear_antigen_1 Arabidopsis_thaliana PHR2 - - - - - 20646326 - - - - - Q8LB72 PHR2_ARATH - Blue-light_photoreceptor_PHR2 Arabidopsis_thaliana PMS1 - - - - - 20646326 - - - - - Q941I6 PMS1_ARATH - DNA_mismatch_repair_protein_PMS1 Arabidopsis_thaliana POLA - - - - - 21867786 - - - - - Q9FHA3 DPOLA_ARATH - DNA_polymerase_alpha_catalytic_subunit Arabidopsis_thaliana PRD1 - - - - - 20646326 - - - - - O23277 PRD1_ARATH - Protein_PRD1 Arabidopsis_thaliana PRP19A - - - - - 20646326 - - - - - Q94BR4 PR19A_ARATH - Pre-mRNA-processing_factor_19_homolog_1 Arabidopsis_thaliana rad1-like - - - - - 20646326 - - - - - Q8L7G8 Q8L7G8_ARATH - At4g17760 Arabidopsis_thaliana RAD17 - - - - - 20646326 - - - - - Q9MBA3 RAD17_ARATH - Cell_cycle_checkpoint_protein_RAD17 Arabidopsis_thaliana RAD23A - - - - - 20646326 - - - - - Q84L32 RD23A_ARATH - Probable_ubiquitin_receptor_RAD23a Arabidopsis_thaliana RAD50 - - - - - 20646326 - - - - - Q9SL02 RAD50_ARATH - DNA_repair_protein_RAD50 Arabidopsis_thaliana RAD51 - - - - - 20646326 - - - - - P94102 RAD51_ARATH - DNA_repair_protein_RAD51_homolog_1 Arabidopsis_thaliana RAD9 - - - - - 20646326 - - - - - Q058K5 Q058K5_ARATH - At3g05480 Arabidopsis_thaliana RBX1A - - - - - 12381738 - - - - - Q940X7 RBX1A_ARATH - RING-box_protein_1a Arabidopsis_thaliana RECQL4A - - - - - 20646326 - - - - - Q8L840 RQL4A_ARATH - ATP-dependent_DNA_helicase_Q-like_4A Arabidopsis_thaliana RFC1 - - - - - 20646326 - - - - - Q9C587 RFC1_ARATH - Replication_factor_C_subunit_1 Arabidopsis_thaliana RFC2 - - - - - 20646326 - - - - - Q9CAM7 RFC2_ARATH - Replication_factor_C_subunit_2 Arabidopsis_thaliana RFC3 - - - - - 20646326 - - - - - Q8VXX4 RFC3_ARATH - Replication_factor_C_subunit_3 Arabidopsis_thaliana RFC4 - - - - - 20646326 - - - - - Q93ZX1 RFC4_ARATH - Replication_factor_C_subunit_4 Arabidopsis_thaliana RFC5 - - - - - 20646326 - - - - - Q9CAQ8 RFC5_ARATH - Replication_factor_C_subunit_5 Arabidopsis_thaliana RPA1A - - - - - 20646326 - - - - - Q9SKI4 RFA1A_ARATH - Replication_protein_A_70_kDa_DNA-binding_subunit_A Arabidopsis_thaliana RPA1C - - - - - 20646326 - - - - - Q9FHJ6 RFA1C_ARATH - Replication_protein_A_70_kDa_DNA-binding_subunit_C Arabidopsis_thaliana RPA2A - - - - - 20646326 - - - - - Q9ZQ19 RFA2A_ARATH - Replication_protein_A_32_kDa_subunit_A Arabidopsis_thaliana RPA3A - - - - - 20646326 - - - - - Q9LXK1 RFA3A_ARATH - Replication_protein_A_14_kDa_subunit_A Arabidopsis_thaliana SIZ1 - - - - - 17905899 - - - - - Q680Q4 SIZ1_ARATH - E3_SUMO-protein_ligase_SIZ1 Arabidopsis_thaliana SMC1 - - - - - 20646326 - - - - - Q6Q1P4 SMC1_ARATH - Structural_maintenance_of_chromosomes_protein_1 Arabidopsis_thaliana SNM1 - - - - - 20646326 - - - - - Q38961 SNM1_ARATH - DNA_cross-link_repair_protein_SNM1 Arabidopsis_thaliana SPO11-1 - - - - - 20646326 - - - - - Q9M4A2 SPO11_ARATH - Meiotic_recombination_protein_SPO11-1 Arabidopsis_thaliana SSRP1 - - - - - 20646326 - - - - - Q05153 SSRP1_ARATH - FACT_complex_subunit_SSRP1 Arabidopsis_thaliana SYN2 - - - - - 21867786 - - - - - Q9FQ20 SCC12_ARATH - Sister_chromatid_cohesion_1_protein_2 Arabidopsis_thaliana T19K4.180 - - - - - 20646326 - - - - - Q8W4I0 Q8W4I0_ARATH - Endonuclease/exonuclease/phosphatase_family_protein Arabidopsis_thaliana T7A14.8 - - - - - 20646326 - - - - - Q9ZVN9 Q9ZVN9_ARATH - P44/SSL1-like_protein Arabidopsis_thaliana TFB1-1 - - - - - 20646326 - - - - - Q3ECP0 TFB1A_ARATH - Probable_RNA_polymerase_II_transcription_factor_B_subunit_1-1 Arabidopsis_thaliana TOP3A - - - - - 20646326 - - - - - Q9LVP1 Q9LVP1_ARATH - DNA_topoisomerase Arabidopsis_thaliana UBC1 - - - - - 20646326 - - - - - P25865 UBC1_ARATH - Ubiquitin-conjugating_enzyme_E2_1 Arabidopsis_thaliana UBC36 - - - - - 20646326 - - - - - Q9FZ48 UBC36_ARATH - Ubiquitin-conjugating_enzyme_E2_36 Arabidopsis_thaliana UBP11 - - - - - Detected_by_InP_as_ortholog_of_hUBP11 - - - - - Q9MAQ3 UBP11_ARATH - Putative_ubiquitin_carboxyl-terminal_hydrolase_11 Arabidopsis_thaliana UEV1B - - - - - 20646326 - - - - - Q9CAB6 UEV1B_ARATH - Ubiquitin-conjugating_enzyme_E2_variant_1B Arabidopsis_thaliana UNG - - - - - 20646326 - - - - - Q9LIH6 Q9LIH6_ARATH - At3g18630 Arabidopsis_thaliana UVH1 - - - - - 20646326 - - - - - Q9LKI5 XPF_ARATH - DNA_repair_endonuclease_UVH1 Arabidopsis_thaliana UVH3 - - - - - 20646326 - - - - - Q9ATY5 UVH3_ARATH - DNA_repair_protein_UVH3 Arabidopsis_thaliana UVH6 - - - - - 20646326 - - - - - Q8W4M7 ERCC2_ARATH - DNA_repair_helicase_UVH6 Arabidopsis_thaliana UVR3 - - - - - 20646326 - - - - - O48652 UVR3_ARATH - (6-4)DNA_photolyase Arabidopsis_thaliana WEE1 - - - - - 17209125 - - - - - Q8L4H0 WEE1_ARATH - Wee1-like_protein_kinase Arabidopsis_thaliana WEX - - - - - 20646326 - - - - - Q84LH3 WEX_ARATH - Werner_Syndrome-like_exonuclease Arabidopsis_thaliana XPB1 - - - - - 20646326 - - - - - Q38861 XPB1_ARATH - DNA_repair_helicase_XPB1 Arabidopsis_thaliana XRCC2 - - - - - 20646326 - - - - - Q682D3 XRCC2_ARATH - DNA_repair_protein_XRCC2_homolog Arabidopsis_thaliana XRCC3 - - - - - 20646326 - - - - - Q9FKM5 XRCC3_ARATH - DNA_repair_protein_XRCC3_homolog Arabidopsis_thaliana XRCC4 - - - - - 20646326 - - - - - Q682V0 XRCC4_ARATH - DNA_repair_protein_XRCC4 Arabidopsis_thaliana XRI1 - - - - - 21867786 - - - - - Q6NLW5 XRI1_ARATH - Protein_XRI1 Arabidopsis_thaliana ZDP - - - - - 20646326 - - - - - Q84JE8 ZDP_ARATH - Polynucleotide_3'-phosphatase_ZDP Escherichia coli (strain K12) cho - - - - - 11818552 - - - - - P76213 CHO_ECOLI - Excinuclease_cho Escherichia coli (strain K12) clpX - - - - - 16630889|21576225 - - - - - P0A6H1 CLPX_ECOLI - ATP-dependent_Clp_protease_ATP-binding_subunit_ClpX Escherichia coli (strain K12) dinB - - - - - 16000023 - - - - - Q47155 DPO4_ECOLI - DNA_polymerase_IV Escherichia coli (strain K12) dinF - - - - - 22523558 - - - - - P28303 DINF_ECOLI - DNA-damage-inducible_protein_F Escherichia coli (strain K12) dinI - - - - - 15954802 - - - - - P0ABR1 DINI_ECOLI - DNA-damage-inducible_protein_I Escherichia coli (strain K12) dnaA - - - - - 1779750|16132081 - - - - - P03004 DNAA_ECOLI - Chromosomal_replication_initiator_protein_DnaA Escherichia coli (strain K12) dnaE - - - - - 12215643 - - - - - P10443 DPO3A_ECOLI - DNA_polymerase_III_subunit_alpha Escherichia coli (strain K12) dnaN - - - - - 16132081 - - - - - P0A988 DPO3B_ECOLI - DNA_polymerase_III_subunit_beta Escherichia coli (strain K12) dnaQ - - - - - 1575709|21576225 - - - - - P03007 DPO3E_ECOLI - DNA_polymerase_III_subunit_epsilon Escherichia coli (strain K12) helD - - - - - 19451222 - - - - - P15038 HELD_ECOLI - Helicase_IV Escherichia coli (strain K12) holE - - - - - 8505306 - - - - - P0ABS8 HOLE_ECOLI - DNA_polymerase_III_subunit_theta Escherichia coli (strain K12) lexA - - - - - 21576225 - - - - - P0A7C2 LEXA_ECOLI - LexA_repressor Escherichia coli (strain K12) ligA - - - - - 17938628 - - - - - P15042 DNLJ_ECOLI - DNA_ligase Escherichia coli (strain K12) lon - - - - - 8995294 - - - - - P0A9M0 LON_ECOLI - Lon_protease Escherichia coli (strain K12) mutH - - - - - 7859291 - - - - - P06722 MUTH_ECOLI - DNA_mismatch_repair_protein_MutH Escherichia coli (strain K12) mutL - - - - - 7859291|16132081 - - - - - P23367 MUTL_ECOLI - DNA_mismatch_repair_protein_MutL Escherichia coli (strain K12) mutM - - - - - 1689309|14607836 - - - - - P05523 FPG_ECOLI - Formamidopyrimidine-DNA_glycosylase Escherichia coli (strain K12) mutS - - - - - 7859291|16132081 - - - - - P23909 MUTS_ECOLI - DNA_mismatch_repair_protein_MutS Escherichia coli (strain K12) polA - - - - - 11352575|21622737 - - - - - P00582 DPO1_ECOLI - DNA_polymerase_I Escherichia coli (strain K12) polB - - - - - 16000023 - - - - - P21189 DPO2_ECOLI - DNA_polymerase_II Escherichia coli (strain K12) recA - - - - - 19052323 - - - - - P0A7G6 RECA_ECOLI - Protein_RecA Escherichia coli (strain K12) recB - - - - - 19052323 - - - - - P08394 EX5B_ECOLI - Exodeoxyribonuclease_V_beta_chain Escherichia coli (strain K12) recC - - - - - 19052323 - - - - - P07648 EX5C_ECOLI - Exodeoxyribonuclease_V_gamma_chain Escherichia coli (strain K12) recD - - - - - 19052323 - - - - - P04993 EX5A_ECOLI - Exodeoxyribonuclease_V_alpha_chain Escherichia coli (strain K12) recF - - - - - 19052323 - - - - - P0A7H0 RECF_ECOLI - DNA_replication_and_repair_protein_RecF Escherichia coli (strain K12) recG - - - - - 19052323 - - - - - P24230 RECG_ECOLI - ATP-dependent_DNA_helicase_RecG Escherichia coli (strain K12) recJ - - - - - 19052323 - - - - - P21893 RECJ_ECOLI - Single-stranded-DNA-specific_exonuclease_RecJ Escherichia coli (strain K12) recN - - - - - 19451222 - - - - - P05824 RECN_ECOLI - DNA_repair_protein_RecN Escherichia coli (strain K12) recO - - - - - 19451222 - - - - - P0A7H3 RECO_ECOLI - DNA_repair_protein_RecO Escherichia coli (strain K12) recQ - - - - - 19052323 - - - - - P15043 RECQ_ECOLI - ATP-dependent_DNA_helicase_RecQ Escherichia coli (strain K12) recR - - - - - 19451222 - - - - - P0A7H6 RECR_ECOLI - Recombination_protein_RecR Escherichia coli (strain K12) recX - - - - - 16000023 - - - - - P33596 RECX_ECOLI - Regulatory_protein_RecX Escherichia coli (strain K12) ruvA - - - - - 9442895 - - - - - P0A809 RUVA_ECOLI - Holliday_junction_ATP-dependent_DNA_helicase_RuvA Escherichia coli (strain K12) ruvB - - - - - 9442895 - - - - - P0A812 RUVB_ECOLI - Holliday_junction_ATP-dependent_DNA_helicase_RuvB Escherichia coli (strain K12) ruvC - - - - - 9442895 - - - - - P0A814 RUVC_ECOLI - Crossover_junction_endodeoxyribonuclease_RuvC Escherichia coli (strain K12) sbcC - - - - - 9927737 - - - - - P13458 SBCC_ECOLI - Nuclease_SbcCD_subunit_C Escherichia coli (strain K12) sbcD - - - - - 9927737 - - - - - P0AG76 SBCD_ECOLI - Nuclease_SbcCD_subunit_D Escherichia coli (strain K12) ssb - - - - - 19052323 - - - - - P0AGE0 SSB_ECOLI - Single-stranded_DNA-binding_protein Escherichia coli (strain K12) sulA - - - - - 16630889 - - - - - P0AFZ5 SULA_ECOLI - Cell_division_inhibitor_SulA Escherichia coli (strain K12) umuC - - - - - 16000023 - - - - - P04152 UMUC_ECOLI - Protein_UmuC Escherichia coli (strain K12) umuD - - - - - 16000023 - - - - - P0AG11 UMUD_ECOLI - Protein_UmuD Escherichia coli (strain K12) uvrA - - - - - 16000023 - - - - - P0A698 UVRA_ECOLI - UvrABC_system_protein_A Escherichia coli (strain K12) uvrB - - - - - 16000023 - - - - - P0A8F8 UVRB_ECOLI - UvrABC_system_protein_B Escherichia coli (strain K12) uvrC - - - - - 16000023 - - - - - P0A8G0 UVRC_ECOLI - UvrABC_system_protein_C Escherichia coli (strain K12) uvrD - - - - - 16000023 - - - - - P03018 UVRD_ECOLI - DNA_helicase_II Escherichia coli (strain K12) yoaA - - - - - Detected_by_InP_as_homolog_of_hERCC2 - - - - - P76257 YOAA_ECOLI - Probable_ATP-dependent_helicase_YoaA Homo_sapiens ATM ATM Plants Sensor-(20674189)|Transducer-(21363960) 35 Checkpoint CHKN 17525332|18082599 >3 LARGE NO - + Q13315 ATM_HUMAN ENSG00000149311 Serine-protein_kinase_ATM Homo_sapiens ATR ATR other_Eukaryotes Sensor-(20674189)|Transducer-(21363960) 35 Checkpoint CHKN 17525332|18082599|20947357 W/A MEDIUM NO - + Q13535 ATR_HUMAN ENSG00000175054 Serine/threonine-protein_kinase_ATR Homo_sapiens ATRIP ATRIP Plants Mediator-(20947357)|Sensor-(21211780) 64 Checkpoint CHKN 18082599|18594563 NA NA NA Undetected NA Q8WXE1 ATRIP_HUMAN ENSG00000164053 ATR-interacting_protein Homo_sapiens BABAM1 MERIT40 Plants Mediator-(19261748) 54 DSBrep DSBN 19261746|19261748|20029420 NA NA NA Undetected NA Q9NWV8 BABA1_HUMAN ENSG00000105393 BRISC_and_BRCA1-A_complex_member_1 Homo_sapiens BARD1 BARD1 Plants Mediator-(19261746) 50 HR GRN 18082599|20029420 NA NA NA Undetected NA Q99728 BARD1_HUMAN ENSG00000138376 BRCA1-associated_RING_domain_protein_1 Homo_sapiens BLM BLM Bacteria Effector-(21325134) 5 Dissolution of joint DNA molecules GRN 15257300|19843584 Cel ALMOST YES + - P54132 BLM_HUMAN ENSG00000197299 Bloom_syndrome_protein Homo_sapiens BRCA1 BRCA1 other_Eukaryotes Mediator-(21363960)|Sensor-(21203981) 49 HR GRN 18082599|20029420|21203981 NO STRICT YES + - P38398 BRCA1_HUMAN ENSG00000012048 Breast_cancer_type_1_susceptibility_protein Homo_sapiens BRCA2 BRCA2 other_Eukaryotes Mediator-(21203981) 76 HR GRN 18082599|19268590|21203981 >3 LARGE NO + - P51587 BRCA2_HUMAN ENSG00000139618 Breast_cancer_type_2_susceptibility_protein Homo_sapiens BRCC3 BRCC3 other_Eukaryotes Mediator-(19261746) 53 HR GRN 18082599 A ALMOST YES + - P46736 BRCC3_HUMAN ENSG00000185515|ENSG00000269884 Lys-63-specific_deubiquitinase_BRCC36 Homo_sapiens BRE BRE/BRC45 other_Eukaryotes Mediator-(19261746) 62 DSBrep DSBN 19261748 Cin/Ame MEDIUM NO + - Q9NXR7 BRE_HUMAN ENSG00000158019 BRCA1-A_complex_subunit_BRE Homo_sapiens BTRC BTRCP Fungi Effector-(22099186) 67 Checkpoint CHKN 18082599 NA NA NA Undetected NA Q9Y297 FBW1A_HUMAN ENSG00000166167 F-box/WD_repeat-containing_protein_1A Homo_sapiens CDC25A MPIP1/CDC25A other_Eukaryotes Effector-(20860841) 78 Checkpoint CHKN 18082599 F ALMOST YES - + P30304 MPIP1_HUMAN ENSG00000164045 M-phase_inducer_phosphatase_1 Homo_sapiens CDC25C MPIP3/CDC25C Fungi Effector-(20860841) 78 Checkpoint CHKN 18082599 F ALMOST YES - + P30307 MPIP3_HUMAN ENSG00000158402 M-phase_inducer_phosphatase_3 Homo_sapiens CDT1 CDT1 other_Eukaryotes Effector-(18082599) 77 block_re-replication CHKN 18082599 NO STRICT YES + - Q9H211 CDT1_HUMAN ENSG00000167513 DNA_replication_factor_Cdt1 Homo_sapiens CHEK1 CHK1 Fungi Transducer-(12781359) 45 Checkpoint CHKN 18082599|19230643|19473886|21088254 W/A ALMOST YES - + O14757 CHK1_HUMAN ENSG00000149554 Serine/threonine-protein_kinase_Chk1 Homo_sapiens CHEK2 CHK2 Unikonta Transducer-(12781359) 45 Checkpoint CHKN 18082599|19230643|19473886 NO STRICT YES - + O96017 CHK2_HUMAN ENSG00000183765 Serine/threonine-protein_kinase_Chk2 Homo_sapiens CLSPN CLSPN Fungi Mediator-(21363960)|Sensor-(21633183) 70 Checkpoint CHKN 18082599 NA NA NA Undetected NA Q9HAW4 CLSPN_HUMAN ENSG00000092853 Claspin Homo_sapiens CUL1 CUL1 other_Eukaryotes Effector-(19231300) 21 Checkpoint CHKN 19903939 NO STRICT YES - + Q13616 CUL1_HUMAN ENSG00000055130 Cullin-1 Homo_sapiens CUL4A CUL4 other_Eukaryotes Effector-(19231300) 21 NERt|block_re-replication Shared 18082599 >3 LARGE NO - + Q13619 CUL4A_HUMAN ENSG00000139842 Cullin-4A Homo_sapiens DCLRE1B Apollo other_Eukaryotes Effector-(18469862) 40 HR GRN 16730175|18469862|19411856 >3 LARGE NO - + Q9H816 DCR1B_HUMAN ENSG00000118655 5'_exonuclease_Apollo Homo_sapiens DCLRE1C Artemis other_Eukaryotes Effector-(20543526) 40 NHEJ GRN 20543526 A ALMOST YES - + Q96SD1 DCR1C_HUMAN ENSG00000152457 Protein_artemis Homo_sapiens DDB1 DDB1 other_Eukaryotes Mediator-(18082599) 33 NERt|block_re-replication Shared 18082599 >3 LARGE NO + - Q16531 DDB1_HUMAN ENSG00000167986 DNA_damage-binding_protein_1 Homo_sapiens DNA2 DNA2L Plants Effector-(21325134) 63 HR GRN 19487465|21325134 NA NA NA Undetected NA P51530 DNA2_HUMAN ENSG00000138346 DNA_replication_ATP-dependent_helicase/nuclease_DNA2 Homo_sapiens DTL DTL/CDT2 other_Eukaryotes Mediator-(18082599) 56 block_re-replication CHKN 18082599 A ALMOST YES + - Q9NZJ0 DTL_HUMAN ENSG00000143476 Denticleless_protein_homolog Homo_sapiens EME1 EME1 Plants Effector-(21859861) 59 Dissolution of joint DNA molecules GRN 12686547 NO STRICT YES + - Q96AY2 EME1_HUMAN ENSG00000154920 Crossover_junction_endonuclease_EME1 Homo_sapiens ERCC1 ERCC1 other_Eukaryotes Effector-(18166977) 22 NER GRN 11357144|16855787|18166977 Cel ALMOST YES + - P07992 ERCC1_HUMAN ENSG00000012061 DNA_excision_repair_protein_ERCC-1 Homo_sapiens ERCC2 ERCC2/XPD other_Eukaryotes Effector-(18166977) 9 NER GRN 11357144|16855787|18166977 NO STRICT YES + - P18074 ERCC2_HUMAN ENSG00000104884 TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit Homo_sapiens ERCC3 ERCC3/XPB Bacteria Effector-(18166977) 3 NER GRN 11357144|16855787|18166977 NO STRICT YES - + P19447 ERCC3_HUMAN ENSG00000163161 TFIIH_basal_transcription_factor_complex_helicase_XPB_subunit Homo_sapiens ERCC4 XPF/ERCC4 other_Eukaryotes Effector-(18166977) 12 NER GRN 11357144|16855787|18166977 W/A MEDIUM NO - + Q92889 XPF_HUMAN ENSG00000175595 DNA_repair_endonuclease_XPF Homo_sapiens ERCC5 ERCC5/XPG other_Eukaryotes Effector-(18166977) 24 NER GRN 11357144|16855787|18166977 >3 LARGE NO - + P28715 ERCC5_HUMAN ENSG00000134899 DNA_repair_protein_complementing_XP-G_cells Homo_sapiens ERCC6 ERCC6/CSB other_Eukaryotes Mediator-(18166977)|Sensor-(18166977) 39 NERt GRN 11357144|16855787|18166977 Bfl ALMOST YES + - Q03468 ERCC6_HUMAN ENSG00000225830 DNA_excision_repair_protein_ERCC-6 Homo_sapiens ERCC8 ERCC8/CSA other_Eukaryotes Effector-(18166977) 51 NERt GRN 11357144|16855787|18166977 Cin ALMOST YES + - Q13216 ERCC8_HUMAN ENSG00000049167 DNA_excision_repair_protein_ERCC-8 Homo_sapiens EXO1 EXO1 other_Eukaryotes Effector-(22326273,14676842,21808022) 24 HR GRN 14676842|18048416 NO STRICT YES - + Q9UQ84 EXO1_HUMAN ENSG00000174371 Exonuclease_1 Homo_sapiens FAM175A Abrasa Vertebrata Mediator-(19261746) 94 DSBrep DSBN 18082599 NA NA NA Undetected NA Q6UWZ7 F175A_HUMAN ENSG00000163322 BRCA1-A_complex_subunit_Abraxas Homo_sapiens FANCD2 FACD2/FANCD2 other_Eukaryotes Effector-(20676667)|Mediator-(20676667) 42 ICL repair GRN 18082599 >3 LARGE NO + - Q9BXW9 FACD2_HUMAN ENSG00000144554 Fanconi_anemia_group_D2_protein Homo_sapiens FANCM FANCM Archaea Sensor-(21975120,22615860) 3 ICL repair GRN 22615860 A/F MEDIUM NO - + Q8IYD8 FANCM_HUMAN ENSG00000187790 Fanconi_anemia_group_M_protein Homo_sapiens FBXO31 FBX31 Metazoa Effector-(19412162) 86 Checkpoint CHKN 18082599|19412162 NA NA NA Undetected NA Q5XUX0 FBX31_HUMAN ENSG00000103264 F-box_only_protein_31 Homo_sapiens H2AFX H2AX other_Eukaryotes Mediator-(20860841) 17 DSBrep DSBN 18082599 >3 LARGE NO + - P16104 H2AX_HUMAN ENSG00000188486 Histone_H2AX Homo_sapiens HERC2 HERC2 Metazoa Mediator-(20023648)|Transducer-(20023648) 72 DSBrep DSBN 20023648|20406985 NA NA NA Undetected NA O95714 HERC2_HUMAN ENSG00000128731|ENSG00000263162 E3_ubiquitin-protein_ligase_HERC2 Homo_sapiens HNRNPK HNRPK Metazoa Effector-(19579069) 75 CC arrest CHKN 19579069 NA NA NA Undetected NA P61978 HNRPK_HUMAN ENSG00000165119 Heterogeneous_nuclear_ribonucleoprotein_K Homo_sapiens HUS1 HUS1 other_Eukaryotes Sensor-(20860841) 38 Checkpoint CHKN 18082599 NA NA unreliable + - O60921 HUS1_HUMAN ENSG00000136273 Checkpoint_protein_HUS1 Homo_sapiens KAT5 KAT5 other_Eukaryotes Effector-(17923702) 41 DSBrep|HR Shared 18082599|20160506 W/A MEDIUM NO - + Q92993 KAT5_HUMAN ENSG00000172977 Histone_acetyltransferase_KAT5 Homo_sapiens KAT8 MYST1 other_Eukaryotes Effector-(20479123) 41 NHEJ GRN 20479123 Cel/Dme MEDIUM NO - + Q9H7Z6 KAT8_HUMAN ENSG00000103510 Histone_acetyltransferase_KAT8 Homo_sapiens LIG4 DNLI4 other_Eukaryotes Effector-(21329706) 37 NHEJ GRN 11357144|21329706 W/A MEDIUM NO + - P49917 DNLI4_HUMAN ENSG00000174405 DNA_ligase_4 Homo_sapiens MAPK3 MK03/ERK1 other_Eukaryotes Transducer-(16186792) 45 CC arrest CHKN 22576881 NO STRICT YES - + P27361 MK03_HUMAN ENSG00000102882 Mitogen-activated_protein_kinase_3 Homo_sapiens MAPKAPK2 MAPK2/MK2 Fungi Transducer-(19230643) 45 Checkpoint CHKN 18082599|19230643 basal ALMOST YES - + P49137 MAPK2_HUMAN ENSG00000162889|ENSG00000266641 MAP_kinase-activated_protein_kinase_2 Homo_sapiens MDC1 MDC1/PAXI1 Vertebrata Mediator-(21363960)|Sensor-(21326949) 89 DSBrep DSBN 18082599|21482717 NA NA NA Undetected NA Q14676 MDC1_HUMAN ENSG00000137337|ENSG00000206481|ENSG00000224587|ENSG00000225589|ENSG00000228575|ENSG00000231135|ENSG00000234012|ENSG00000237095 Mediator_of_DNA_damage_checkpoint_protein_1 Homo_sapiens MDM2 mdm2 Metazoa Effector-(21541195) 88 CC arrest CHKN 18082599 NA NA NA Undetected NA Q00987 MDM2_HUMAN ENSG00000135679 E3_ubiquitin-protein_ligase_Mdm2 Homo_sapiens MDM4 mdm4 Vertebrata Effector-(21541195) 88 CC arrest CHKN 18082599 NA NA NA Undetected NA O15151 MDM4_HUMAN ENSG00000198625 Protein_Mdm4 Homo_sapiens MLH1 MLH1 Bacteria Sensor-(16612326) 6 Mismatch GRN 11920679|16464007|16612326 Cel/A MEDIUM NO - + P40692 MLH1_HUMAN ENSG00000076242 DNA_mismatch_repair_protein_Mlh1 Homo_sapiens MRE11A MRE11 other_Eukaryotes Sensor-(21363960) 13 DSBrep|HR Shared 18082599|21252998 W/A MEDIUM NO + - P49959 MRE11_HUMAN ENSG00000020922 Double-strand_break_repair_protein_MRE11A Homo_sapiens MSH2 MSH2 other_Eukaryotes Sensor-(16612326,21975120) 2 Mismatch GRN 11920679|16464007|16612326 Cel/A MEDIUM NO - + P43246 MSH2_HUMAN ENSG00000095002 DNA_mismatch_repair_protein_Msh2 Homo_sapiens MSH3 MSH3 Bacteria Sensor-(16612326,21975120) 2 Mismatch GRN 11920679|16464007|16612326|17525332 Cel/A MEDIUM NO - + P20585 MSH3_HUMAN ENSG00000113318 DNA_mismatch_repair_protein_Msh3 Homo_sapiens MSH6 MSH6 Bacteria Sensor-(16612326,21975120)|Transducer-(21075794) 2 Mismatch GRN 11920679|16464007|16612326|21075794 Cel/A MEDIUM NO - + P52701 MSH6_HUMAN ENSG00000116062 DNA_mismatch_repair_protein_Msh6 Homo_sapiens MTA2 MTA2 Metazoa Sensor-(20805320) 79 RF RFN 12920132|IRB_DDRMeeting2012VConstanzo NA NA NA Undetected NA O94776 MTA2_HUMAN ENSG00000149480 Metastasis-associated_protein_MTA2 Homo_sapiens MUS81 MUS81 other_Eukaryotes Effector-(21859861) 12 Dissolution of joint DNA molecules GRN 12686547 >3 LARGE NO - + Q96NY9 MUS81_HUMAN ENSG00000172732 Crossover_junction_endonuclease_MUS81 Homo_sapiens NBN NBN Plants Effector-(21252998)|Mediator-(21252998)|Sensor-(18082599)|Transducer-(18082599) 61 DSBrep|HR Shared 18082599|21252998 NA NA NA Undetected NA O60934 NBN_HUMAN ENSG00000104320 Nibrin Homo_sapiens NHEJ1 XLF Fungi Effector-(16439205) 71 NHEJ GRN 16571728|17038309|21329706 NA NA NA Undetected NA Q9H9Q4 NHEJ1_HUMAN ENSG00000187736 Non-homologous_end-joining_factor_1 Homo_sapiens NR4A2 NR4A2 Bilateria Mediator-(21979916) 73 RF|BER|NHEJ Shared 21979916 NA NA NA Undetected NA P43354 NR4A2_HUMAN ENSG00000153234 Nuclear_receptor_subfamily_4_group_A_member_2 Homo_sapiens NSMCE2 MMS21 other_Eukaryotes Transducer-(22369641) 52 HR GRN 16055714 >3 LARGE NO + - Q96MF7 NSE2_HUMAN ENSG00000156831 E3_SUMO-protein_ligase_NSE2 Homo_sapiens PALB2 PALB2 Vertebrata Mediator-(21203981) 93 DSBrep|HR Shared 19268590|21203981 NA NA NA Vertebrate specific NA Q86YC2 PALB2_HUMAN ENSG00000083093 Partner_and_localizer_of_BRCA2 Homo_sapiens PARP1 PARP1 other_Eukaryotes Sensor-(20965415) 43 BER GRN 18082599 W/A MEDIUM NO - + P09874 PARP1_HUMAN ENSG00000143799 Poly_[ADP-ribose]_polymerase_1 Homo_sapiens PARP2 PARP2 other_Eukaryotes Sensor-(20965415) 43 BER GRN 19847258 Cin ALMOST YES - + Q9UGN5 PARP2_HUMAN ENSG00000129484 Poly_[ADP-ribose]_polymerase_2 Homo_sapiens PAXIP1 PAXI1 other_Eukaryotes Mediator-(21363960) 58 DSBrep|HR Shared 21035408 NA NA NA Not_the_smae_MDC1 NA Q6ZW49 PAXI1_HUMAN ENSG00000157212 PAX-interacting_protein_1 Homo_sapiens PCNA PCNA Archaea Effector-(20068082)|Mediator-(17512402) 4 block_re-replication CHKN 18082599|20074041 Cel ALMOST YES + - P12004 PCNA_HUMAN ENSG00000132646 Proliferating_cell_nuclear_antigen Homo_sapiens PIAS1 PIAS1 Plants Effector-(20016603) 55 DSBrep DSBN 20016603|20074042 NO STRICT YES - + O75925 PIAS1_HUMAN ENSG00000033800 E3_SUMO-protein_ligase_PIAS1 Homo_sapiens PIAS4 PIAS4 Vertebrata Effector-(20016603) 55 DSBrep DSBN 20016603|20074042 NO STRICT YES - + Q8N2W9 PIAS4_HUMAN ENSG00000105229 E3_SUMO-protein_ligase_PIAS4 Homo_sapiens PLK1 PLK1 Bacteria Transducer-(20126263) 65 Checkpoint CHKN 18082599|20126263 <3 ALMOST YES + - P53350 PLK1_HUMAN ENSG00000166851 Serine/threonine-protein_kinase_PLK1 Homo_sapiens PMS2 PMS2 other_Eukaryotes Mediator-(16612326)|Sensor-(16612326) 6 Mismatch GRN 11920679|16464007|16612326 Cel/A MEDIUM NO - + P54278 PMS2_HUMAN ENSG00000122512 Mismatch_repair_endonuclease_PMS2 Homo_sapiens PRKDC PKRCD other_Eukaryotes Transducer-(21211780) 35 NHEJ GRN 11357144|21487018|21514376 >3 LARGE NO - + P78527 PRKDC_HUMAN ENSG00000253729 DNA-dependent_protein_kinase_catalytic_subunit Homo_sapiens RAD1 RAD1 other_Eukaryotes Sensor-(21363960) 28 Checkpoint CHKN 18082599 W/A MEDIUM NO + - O60671 RAD1_HUMAN ENSG00000113456 Cell_cycle_checkpoint_protein_RAD1 Homo_sapiens RAD17 RAD17 other_Eukaryotes Sensor-(20068082) 26 Checkpoint CHKN 18082599 W/A MEDIUM NO + - O75943 RAD17_HUMAN ENSG00000152942|ENSG00000262511 Cell_cycle_checkpoint_protein_RAD17 Homo_sapiens RAD18 RAD18 other_Eukaryotes Transducer-(19396164) 46 DSBrep DSBN 18082599|20971043 <3 MEDIUM NO + - Q9NS91 RAD18_HUMAN ENSG00000070950 E3_ubiquitin-protein_ligase_RAD18 Homo_sapiens RAD23B rAD23B other_Eukaryotes Sensor-(18166977) 11 NERg GRN 11357144|16855787|18166977 <3 MEDIUM NO + - P54727 RD23B_HUMAN ENSG00000119318 UV_excision_repair_protein_RAD23_homolog_B Homo_sapiens RAD50 RAD50 Archaea Sensor-(20860841) 1 DSBrep|HR Shared 18082599|21252998 Cel ALMOST YES + - Q92878 RAD50_HUMAN ENSG00000113522 DNA_repair_protein_RAD50 Homo_sapiens RAD51 RAD51 Bacteria Sensor-(21252998) 0 DSBrep|HR Shared 18082599 Cel/A MEDIUM NO + - Q06609 RAD51_HUMAN ENSG00000051180 DNA_repair_protein_RAD51_homolog_1 Homo_sapiens RAD9A RAD9 other_Eukaryotes Sensor-(20860841) 30 Checkpoint CHKN 18082599 Cel/A MEDIUM NO + - Q99638 RAD9A_HUMAN ENSG00000172613 Cell_cycle_checkpoint_control_protein_RAD9A Homo_sapiens RBBP8 CTIP Bilateria Effector-(20029420) 83 HR GRN 17965729 NA NA NA Undetected NA Q99708 COM1_HUMAN ENSG00000101773 DNA_endonuclease_RBBP8 Homo_sapiens RBX1 RBX1 other_Eukaryotes Effector-(19231300) 10 Checkpoint CHKN 18082599|21115485 unreliable unreliable unreliable + - P62877 RBX1_HUMAN ENSG00000100387 E3_ubiquitin-protein_ligase_RBX1 Homo_sapiens RMI1 RMI Plants Mediator-(15775963)|Transducer-(15775963) 80 Dissolution of joint DNA molecules GRN 15775963|16595695 NA NA NA Undetected NA Q9H9A7 RMI1_HUMAN ENSG00000178966 RecQ-mediated_genome_instability_protein_1 Homo_sapiens RNF168 RNF18 Chordata Mediator-(19203579)|Transducer-(19875294) 90 DSBrep DSBN 19203579 NA NA NA Vertebrate specific NA Q8IYW5 RN168_HUMAN ENSG00000163961 E3_ubiquitin-protein_ligase_RNF168 Homo_sapiens RNF8 RNF8 other_Eukaryotes Mediator-(18001825)|Transducer-(18550271) 82 DSBrep DSBN 18082599 NA NA NA Undetected NA O76064 RNF8_HUMAN ENSG00000112130 E3_ubiquitin-protein_ligase_RNF8 Homo_sapiens RPA1 RFA1 other_Eukaryotes Sensor-(12791985) 16 HR GRN 18082599|18166977 Cel/A MEDIUM NO + - P27694 RFA1_HUMAN ENSG00000132383 Replication_protein_A_70_kDa_DNA-binding_subunit Homo_sapiens RPA2 RFA2 other_Eukaryotes Mediator-(17531546)|Sensor-(12791985) 34 HR GRN 18082599|18166977 >3 LARGE NO + - P15927 RFA2_HUMAN ENSG00000117748 Replication_protein_A_32_kDa_subunit Homo_sapiens RPA3 RFA3 other_Eukaryotes Mediator-(19843584)|Sensor-(12791985) 23 HR GRN 18082599|18166977 >4 LARGE NO + - P35244 RFA3_HUMAN ENSG00000106399 Replication_protein_A_14_kDa_subunit Homo_sapiens SIRT1 SIR1 Unikonta Transducer-(20097625,20670893) 68 NHEJ GRN 22586264 NA NA NA Undetected NA Q96EB6 SIR1_HUMAN ENSG00000096717 NAD-dependent_protein_deacetylase_sirtuin-1 Homo_sapiens SKP1 SKP1 other_Eukaryotes Effector-(22099186) 15 Checkpoint CHKN 19903939 Ath ALMOST YES + - P63208 SKP1_HUMAN ENSG00000113558 S-phase_kinase-associated_protein_1 Homo_sapiens SLX1A SLX1 other_Eukaryotes Effector-(19596236) 66 Dissolution of joint DNA molecules GRN 19596236 >3 LARGE NO + - Q9BQ83 SLX1_HUMAN ENSG00000132207|ENSG00000181625 Structure-specific_endonuclease_subunit_SLX1 Homo_sapiens SLX4 SLX4 Metazoa Effector-(19596236)|Mediator-(19596236) 85 Dissolution of joint DNA molecules GRN 19596235|19596236 NA NA NA Undetected NA Q8IY92 SLX4_HUMAN ENSG00000188827 Structure-specific_endonuclease_subunit_SLX4 Homo_sapiens SMARCAL1 SMAL1/SMARCAL1 other_Eukaryotes Effector-(19841479) 44 RF RFN 19793861|19841479 >3 LARGE NO + - Q9NZC9 SMAL1_HUMAN ENSG00000138375 SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_A-like_protein_1 Homo_sapiens SMC1A SMC1A Bacteria Effector-(19842212) 8 DSBrep DSBN 19842212|21139141 Cel/Plants MEDIUM NO - + Q14683 SMC1A_HUMAN ENSG00000072501|ENSG00000269384 Structural_maintenance_of_chromosomes_protein_1A Homo_sapiens SMC5 SMC5 other_Eukaryotes Mediator-(16810316) 8 HR GRN 17589526 Cel/Plants MEDIUM NO - + Q8IY18 SMC5_HUMAN ENSG00000198887 Structural_maintenance_of_chromosomes_protein_5 Homo_sapiens SMC6 SMC6 other_Eukaryotes Mediator-(16810316) 8 HR GRN 17589526 Cel/A MEDIUM NO - + Q96SB8 SMC6_HUMAN ENSG00000163029 Structural_maintenance_of_chromosomes_protein_6 Homo_sapiens SOX4 SOX4 Chordata Effector-(19234109) 87 CC arrest CHKN 19234109 NA NA NA Undetected NA Q06945 SOX4_HUMAN ENSG00000124766 Transcription_factor_SOX-4 Homo_sapiens TAOK1 TAOK1 Bacteria Transducer-(18082599) 45 Checkpoint CHKN 18082599 Cin/Bfl ALMOST YES - + Q7L7X3 TAOK1_HUMAN ENSG00000160551 Serine/threonine-protein_kinase_TAO1 Homo_sapiens TDP1 TYDP1/TDP1 other_Eukaryotes Effector-(16141202) 25 ssbRepair GRN 16141202 W/A MEDIUM NO + - Q9NUW8 TYDP1_HUMAN ENSG00000042088 Tyrosyl-DNA_phosphodiesterase_1 Homo_sapiens TDP2 TDP2/TYDP2 other_Eukaryotes Effector-(22740648) 48 ssbRepair GRN 19794497 NO STRICT YES + - O95551 TYDP2_HUMAN ENSG00000111802 Tyrosyl-DNA_phosphodiesterase_2 Homo_sapiens TERF2 TERF2 Vertebrata Mediator-(19287395) 92 RF RFN 20655466 NA NA NA Vertebrate specific NA Q15554 TERF2_HUMAN ENSG00000132604 Telomeric_repeat-binding_factor_2 Homo_sapiens TIMELESS TIM/TIMELESS other_Eukaryotes Effector-(17296725)|Mediator-(20068082) 29 RF RFN 20233725 W/A MEDIUM NO + - Q9UNS1 TIM_HUMAN ENSG00000111602 Protein_timeless_homolog Homo_sapiens TIPIN TIPIN Plants Mediator-(20068082) 57 RF RFN 20233725 NA NA NA Undetected NA Q9BVW5 TIPIN_HUMAN ENSG00000075131 TIMELESS-interacting_protein Homo_sapiens TOP3A TOP3A Bacteria Effector-(16595695) 7 Dissolution of joint DNA molecules GRN 16595695 W/A MEDIUM NO + - Q13472 TOP3A_HUMAN ENSG00000177302 DNA_topoisomerase_3-alpha Homo_sapiens TOPBP1 TOPB1 other_Eukaryotes Mediator-(21363960) 27 Checkpoint CHKN 18082599|19464966 W/A MEDIUM NO + - Q92547 TOPB1_HUMAN ENSG00000163781 DNA_topoisomerase_2-binding_protein_1 Homo_sapiens TP53BP1 53BP1 Metazoa Mediator-(20724228)|Sensor-(21633183) 84 DSBrep DSBN 18082599 NA NA NA Undetected NA Q12888 TP53B_HUMAN ENSG00000067369 Tumor_suppressor_p53-binding_protein_1 Homo_sapiens TRIM28 KAP1/TIF1B Bilateria Mediator-(17056014)|Transducer-(18082607) 81 Checkpoint CHKN 17056014|17178852 NA NA NA Undetected NA Q13263 TIF1B_HUMAN ENSG00000130726 Transcription_intermediary_factor_1-beta Homo_sapiens TRIP12 TRIPC/TRIP12 other_Eukaryotes Transducer-(17525332) 36 DSBrep DSBN 17525332|22884692 W ALMOST YES + - Q14669 TRIPC_HUMAN ENSG00000153827 E3_ubiquitin-protein_ligase_TRIP12 Homo_sapiens UBE2N UBE2N/UBEC13 Bacteria Transducer-(18082599) 20 DSBrep DSBN 18082599 >3 LARGE NO - + P61088 UBE2N_HUMAN ENSG00000177889 Ubiquitin-conjugating_enzyme_E2_N Homo_sapiens UBE2T UBE2T Bacteria Transducer-(22615860) 20 ICL repair GRN 22615860 >3 LARGE NO - + Q9NPD8 UBE2T_HUMAN ENSG00000077152 Ubiquitin-conjugating_enzyme_E2_T Homo_sapiens UBR5 UBR5 Metazoa Transducer-(11714696) 74 RF RFN 11714696|22884692 NA NA NA Undetected NA O95071 UBR5_HUMAN ENSG00000104517 E3_ubiquitin-protein_ligase_UBR5 Homo_sapiens UIMC1 UIMC1 Vertebrata Mediator-(19261746) 91 DSBrep DSBN 17525341|18082599 NA NA NA Vertebrate specific NA Q96RL1 UIMC1_HUMAN ENSG00000087206 BRCA1-A_complex_subunit_RAP80 Homo_sapiens USP11 USP11 other_Eukaryotes Effector-(15314155) 14 DSBrep DSBN 20233726 >3 LARGE NO + - P51784 UBP11_HUMAN ENSG00000102226 Ubiquitin_carboxyl-terminal_hydrolase_11 Homo_sapiens WEE1 WEE1 other_Eukaryotes Effector-(19230643)|Transducer-(21859861) 45 Checkpoint CHKN 18082599 >3 LARGE NO - + P30291 WEE1_HUMAN ENSG00000166483 Wee1-like_protein_kinase Homo_sapiens XPA XPA other_Eukaryotes Effector-(18166977) 69 NER GRN 11357144|16855787|18166977 <3 ALMOST YES + - P23025 XPA_HUMAN ENSG00000136936 DNA_repair_protein_complementing_XP-A_cells Homo_sapiens XPC XPC other_Eukaryotes Sensor-(18166977) 19 NERg GRN 11357144|16855787|18166977 W/A MEDIUM NO + - Q01831 XPC_HUMAN ENSG00000154767 DNA_repair_protein_complementing_XP-C_cells Homo_sapiens XRCC1 XRCC1 other_Eukaryotes Mediator-(19497792) 47 BER GRN 18971944 NO STRICT YES + - P18887 XRCC1_HUMAN ENSG00000073050 DNA_repair_protein_XRCC1 Homo_sapiens XRCC4 XRCC4 Plants Mediator-(17241822) 60 NHEJ GRN 11357144|21329706 NA NA NA Undetected NA Q13426 XRCC4_HUMAN ENSG00000152422 DNA_repair_protein_XRCC4 Homo_sapiens XRCC5 XRCC5 other_Eukaryotes Sensor-(21211780) 31 NHEJ GRN 19260023 >3 LARGE NO + - P13010 XRCC5_HUMAN ENSG00000079246 X-ray_repair_cross-complementing_protein_5 Homo_sapiens XRCC6 XRCC6 other_Eukaryotes Sensor-(21211780) 32 NHEJ GRN 19260023 >3 LARGE NO + - P12956 XRCC6_HUMAN ENSG00000196419 X-ray_repair_cross-complementing_protein_6 Homo_sapiens YWHAE 14-3-3E other_Eukaryotes Effector-(21945648)|Mediator-(21945648) 18 Checkpoint CHKN 18082599|20413225 W ALMOST YES + - P62258 1433E_HUMAN ENSG00000108953 14-3-3_protein_epsilon Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) BMH2 - - - - - Detected_by_InP_as_ortholog_of_h1433E - - - P34730 BMH2_YEAST - Protein_BMH2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CDC5 - - - - - 15920482 - - - P32562 CDC5_YEAST - Cell_cycle_serine/threonine-protein_kinase_CDC5/MSD2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CDC53 - - - - - Detected_by_InP_as_ortholog_of_hCUL1 - - - Q12018 CDC53_YEAST - Cell_division_control_protein_53 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CHK1 - - - - - 19464966 - - - P38147 CHK1_YEAST - Serine/threonine-protein_kinase_CHK1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CSM3 - - - - - 21127252 - - - Q04659 CSM3_YEAST - Chromosome_segregation_in_meiosis_protein_3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CTF18 - - - - - 21127252 - - - P49956 CTF18_YEAST - Chromosome_transmission_fidelity_protein_18 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) CTF8 - - - - - 21127252 - - - P38877 CTF8_YEAST - Chromosome_transmission_fidelity_protein_8 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) DCC1 - - - - - 21127252 - - - P25559 DCC1_YEAST - Sister_chromatid_cohesion_protein_DCC1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) DDC1 - - - - - 19464966 - - - Q08949 DDC1_YEAST - DNA_damage_checkpoint_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) DMA2 - - - - - 15146058 - - - P53924 DMA2_YEAST - E3_ubiquitin-protein_ligase_DMA2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) DNL4 - - - - - 16388993 - - - Q08387 DNLI4_YEAST - DNA_ligase_4 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) DUN1 - - - - - 10357828 - - - P39009 DUN1_YEAST - DNA_damage_response_protein_kinase_DUN1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) ESA1 - - - - - 12353039 - - - Q08649 ESA1_YEAST - Histone_acetyltransferase_ESA1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) HRT1 - - - - - 10579999 - - - Q08273 RBX1_YEAST - RING-box_protein_HRT1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) HTA2 - - - - - 11140636 - - - P04912 H2A2_YEAST - Histone_H2A.2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) KIC1 - - - - - Detected_by_InP_as_ortholog_of_hTAOK1 - - - P38692 KIC1_YEAST - Serine/threonine-protein_kinase_KIC1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) LCD1 - - - - - 11060031 - - - Q04377 LCD1_YEAST - DNA_damage_checkpoint_protein_LCD1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) LIF1 - - - - - 16388993 - - - P53150 LIF1_YEAST - Ligase-interacting_factor_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MEC1 - - - - - 19464966 - - - P38111 ATR_YEAST - Serine/threonine-protein_kinase_MEC1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MEC3 - - - - - 19464966 - - - Q02574 MEC3_YEAST - DNA_damage_checkpoint_control_protein_MEC3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MEK1 - - - - - 1741279 - - - P24719 MEK1_YEAST - Meiosis-specific_serine/threonine-protein_kinase_MEK1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MET18 - - - - - 8943333 - - - P40469 MET18_YEAST - DNA_repair/transcription_protein_MET18/MMS19 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MIH1 - - - - - Detected_by_InP_as_ortholog_of_hMPIP3 - - - P23748 MPIP_YEAST - M-phase_inducer_phosphatase Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MLH1 - - - - - 9368761 - - - P38920 MLH1_YEAST - DNA_mismatch_repair_protein_MLH1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MMS1 - - - - - 21127252 - - - Q06211 MMS1_YEAST - Methyl_methanesulfonate-sensitivity_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MMS2 - - - - - 11440714 - - - P53152 MMS2_YEAST - Ubiquitin-conjugating_enzyme_variant_MMS2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MMS22 - - - - - 15718301 - - - Q06164 MMS22_YEAST - Methyl_methanesulfonate-sensitivity_protein_22 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MPH1 - - - - - 15126389 - - - P40562 MPH1_YEAST - ATP-dependent_DNA_helicase_MPH1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MRC1 - - - - - 21127252 - - - P25588 MRC1_YEAST - Mediator_of_replication_checkpoint_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MRE11 - - - - - 20348017 - - - P32829 MRE11_YEAST - Double-strand_break_repair_protein_MRE11 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MSH2 - - - - - 9368761 - - - P25847 MSH2_YEAST - DNA_mismatch_repair_protein_MSH2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MSH3 - - - - - 9368761 - - - P25336 MSH3_YEAST - DNA_mismatch_repair_protein_MSH3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) MSH6 - - - - - 8723353 - - - Q03834 MSH6_YEAST - DNA_mismatch_repair_protein_MSH6 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) NEJ1 - - - - - 16388993 - - - Q06148 NEJ1_YEAST - Non-homologous_end-joining_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) NFI1 - - - - - Detected_by_InP_as_ortholog_of_hPIAS4 - - - Q12216 SIZ2_YEAST - E3_SUMO-protein_ligase_SIZ2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) PMS1 - - - - - 20981145 - - - P14242 PMS1_YEAST - DNA_mismatch_repair_protein_PMS1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) POL30 - - - - - 20981145 - - - P15873 PCNA_YEAST - Proliferating_cell_nuclear_antigen Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) POL4 - - - - - 12235149 - - - P25615 DPO4_YEAST - DNA_polymerase_IV Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) PSY2 - - - - - 16299494 - - - P40164 PP4R3_YEAST - Serine/threonine-protein_phosphatase_4_regulatory_subunit_3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) PSY3 - - - - - 21127252 - - - Q12318 PSY3_YEAST - Platinum_sensitivity_protein_3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) PSY4 - - - - - 21127252 - - - P38193 PP4R2_YEAST - Serine/threonine-protein_phosphatase_4_regulatory_subunit_2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD1 - - - - - 8479526 - - - P06777 RAD1_YEAST - DNA_repair_protein_RAD1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD10 - - - - - 20981145 - - - P06838 RAD10_YEAST - DNA_repair_protein_RAD10 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD14 - - - - - 20981145 - - - P28519 RAD14_YEAST - DNA_repair_protein_RAD14 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD16 - - - - - 20348017 - - - P31244 RAD16_YEAST - DNA_repair_protein_RAD16 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD17 - - - - - 19464966 - - - P48581 RAD17_YEAST - DNA_damage_checkpoint_control_protein_RAD17 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD18 - - - - - 15388802 - - - P10862 RAD18_YEAST - Postreplication_repair_E3_ubiquitin-protein_ligase_RAD18 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD2 - - - - - 20981145 - - - P07276 RAD2_YEAST - DNA_repair_protein_RAD2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD23 - - - - - 20981145 - - - P32628 RAD23_YEAST - UV_excision_repair_protein_RAD23 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD24 - - - - - 15369670|19464966 - - - P32641 RAD24_YEAST - Checkpoint_protein_RAD24 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD26 - - - - - 12024048 - - - P40352 RAD26_YEAST - DNA_repair_and_recombination_protein_RAD26 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD3 - - - - - 8631896 - - - P06839 RAD3_YEAST - DNA_repair_helicase_RAD3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD4 - - - - - 9837874 - - - P14736 RAD4_YEAST - DNA_repair_protein_RAD4 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD5 - - - - - 16224103 - - - P32849 RAD5_YEAST - DNA_repair_protein_RAD5 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD50 - - - - - 20981145 - - - P12753 RAD50_YEAST - DNA_repair_protein_RAD50 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD51 - - - - - 12235149 - - - P25454 RAD51_YEAST - DNA_repair_protein_RAD51 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD52 - - - - - 21127252 - - - P06778 RAD52_YEAST - DNA_repair_and_recombination_protein_RAD52 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD53 - - - - - 12724400|19464966 - - - P22216 RAD53_YEAST - Serine/threonine-protein_kinase_RAD53 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD54 - - - - - 15369670 - - - P32863 RAD54_YEAST - DNA_repair_and_recombination_protein_RAD54 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD55 - - - - - 15369670 - - - P38953 RAD55_YEAST - DNA_repair_protein_RAD55 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD57 - - - - - 15369670 - - - P25301 RAD57_YEAST - DNA_repair_protein_RAD57 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD59 - - - - - 15369670 - - - Q12223 RAD59_YEAST - DNA_repair_protein_RAD59 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD7 - - - - - 15177043 - - - P06779 RAD7_YEAST - DNA_repair_protein_RAD7 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RAD9 - - - - - 19464966 - - - P14737 RAD9_YEAST - DNA_repair_protein_RAD9 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RCK1 - - - - - 10778743|19230643 - - - P38622 RCK1_YEAST - Serine/threonine-protein_kinase_RCK1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RCK2 - - - - - 10778743|19230643 - - - P38623 RCK2_YEAST - Serine/threonine-protein_kinase_RCK2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RFA1 - - - - - 20981145 - - - P22336 RFA1_YEAST - Replication_factor_A_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RFA2 - - - - - 20981145 - - - P26754 RFA2_YEAST - Replication_factor_A_protein_2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RFA3 - - - - - 20981145 - - - P26755 RFA3_YEAST - Replication_factor_A_protein_3 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RFX1 - - - - - 16107689 - - - P48743 RFX1_YEAST - RFX-like_DNA-binding_protein_RFX1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RTT101 - - - - - 22353182 - - - P47050 CUL8_YEAST - Regulator_of_Ty1_transposition_protein_101 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) RTT109 - - - - - 17272722 - - - Q07794 RT109_YEAST - Histone_acetyltransferase_RTT109 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SAE2 - - - - - 9215887 - - - P46946 COM1_YEAST - DNA_endonuclease_SAE2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SGS1 - - - - - 20981145 - - - P35187 SGS1_YEAST - ATP-dependent_helicase_SGS1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SKP1 - - - - - 8706132 - - - P52286 SKP1_YEAST - Suppressor_of_kinetochore_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SLX5 - - - - - 17591698|21127252 - - - P32828 SLX5_YEAST - E3_ubiquitin-protein_ligase_complex_SLX5-SLX8_subunit_SLX5 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SLX8 - - - - - 17591698 - - - P40072 SLX8_YEAST - E3_ubiquitin-protein_ligase_complex_SLX5-SLX8_subunit_SLX8 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SMC1 - - - - - 11983169 - - - P32908 SMC1_YEAST - Structural_maintenance_of_chromosomes_protein_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SMC5 - - - - - 15738391 - - - Q08204 SMC5_YEAST - Structural_maintenance_of_chromosomes_protein_5 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SMC6 - - - - - 15738391 - - - Q12749 SMC6_YEAST - Structural_maintenance_of_chromosomes_protein_6 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SSL2 - - - - - 20981145 - - - Q00578 RAD25_YEAST - DNA_repair_helicase_RAD25 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SWE1 - - - - - 15920482 - - - P32944 SWE1_YEAST - Mitosis_inhibitor_protein_kinase_SWE1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) SWI4 - - - - - 12724400 - - - P25302 SWI4_YEAST - Regulatory_protein_SWI4 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) TEL1 - - - - - 19464966 - - - P38110 ATM_YEAST - Serine/threonine-protein_kinase_TEL1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) TOF1 - - - - - 21127252 - - - P53840 TOF1_YEAST - Topoisomerase_1-associated_factor_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) UBC13 - - - - - 21127252 - - - P52490 UBC13_YEAST - Ubiquitin-conjugating_enzyme_E2_13 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) UBC4 - - - - - 18202552 - - - P15731 UBC4_YEAST - Ubiquitin-conjugating_enzyme_E2_4 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) UBP12 - - - - - Detected_by_InP_as_ortholog_of_hUBP11 - - - P39538 UBP12_YEAST - Ubiquitin_carboxyl-terminal_hydrolase_12 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) XRS2 - - - - - 20981145 - - - P33301 XRS2_YEAST - DNA_repair_protein_XRS2 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) YKU70 - - - - - 21127252 - - - P32807 KU70_YEAST - ATP-dependent_DNA_helicase_II_subunit_1 Saccharomyces_cerevisiae_(strain_ATCC_204508_/_S288c) YKU80 - - - - - 21127252 - - - Q04437 KU80_YEAST - ATP-dependent_DNA_helicase_II_subunit_2